Insertion junction: CLIP2.041207_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.041207
Chromosome:chromosome 1
Location:1962418
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g010832 (1 of 1) PTHR12411:SF389 - CATHEPSIN L1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGATGGAGGGGCAGGATGAGGTGCACCATCAGGCGGTGTGAGCAGCCAC
Internal bar code:TTAATTCACGCACGAGATTAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1205
LEAP-Seq percent confirming:30.4348
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:ACACCAGCCAGTTCCCAAAA
Suggested primer 2:TGTCGACCTTGTGAGTTCCG