Insertion junction: CLIP2.041210_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.041210
Chromosome:chromosome 8
Location:2616994
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g373200 FXL7 FixL-like PAS domain protein; (1 of 11) PF13426 - PAS domain (PAS_9) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGGATGCGCAGACGCGTGTAGGCGGCGGGCGACGCCATGACGCCGTGC
Internal bar code:TATAGTTACTGACCTTTATGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:876
LEAP-Seq percent confirming:36.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCAGTCATTTACGACGTC
Suggested primer 2:GAAGGCTTCTGATGGGTGCT