Insertion junction: CLIP2.041210_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.041210
Chromosome:chromosome 8
Location:2616997
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g373200 FXL7 FixL-like PAS domain protein; (1 of 11) PF13426 - PAS domain (PAS_9) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGGTAGGCTGGGCTGCAGACACACGGCTTTCCCTGGAGGGCGCTGGC
Internal bar code:GTGGTATTGAGTTATGGGGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1768
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGGCTTCTGATGGGTGCT
Suggested primer 2:GCGCAGTCATTTACGACGTC