Insertion junction: CLIP2.041212_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.041212
Chromosome:chromosome 9
Location:4559803
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401256 (1 of 13) PF05050 - Methyltransferase FkbM domain (Methyltransf_21) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGATACATACATGGCACCGGCGCTGGGCCCGCCCGCCCTCCGGGCCCAA
Internal bar code:ATGATATGAATCCTCGGGACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:390
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTAACACGCACCCGCAAA
Suggested primer 2:AAGAAGCAGCTGTAGCCCAG