Insertion junction: CLIP2.041213_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.041213
Chromosome:chromosome 9
Location:2876738
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g390678 (1 of 1) K17500 - integrin-linked kinase-associated serine/threonine phosphatase 2C [EC:3.1.3.16] (ILKAP) intron
lncRNA_TCONS_00128634 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTTGGGGTTTACACAATCACACGTGGAGCGGGAGCGGTCCCAGGGTTC
Internal bar code:CAAGGAGATGATGTCATAGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2593
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTGCGGAGGAGTTCTTC
Suggested primer 2:CCCCGTGGGTTCTGAAATGA