Insertion junction: CLIP2.041216_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.041216
Chromosome:chromosome 17
Location:1814585
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g709250 (1 of 1) PTHR23137:SF3 - VESICLE TRANSPORT PROTEIN SFT2C CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGCGGTCAAGCCAGCACACAGCCGGCCCAACCGTCGCTGTTAGCCGA
Internal bar code:CAAACTTACGGTCTTGGTCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:5237
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:84
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGCCAAGAAGCAGAAAAA
Suggested primer 2:CCCCCAACTCGATACGATGG