Insertion junction: CLIP2.041218_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.041218
Chromosome:chromosome 10
Location:3168989
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g441800 (1 of 4) PF05066 - HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGATGGAAATACAGCCTCGTGCAGGTTGCAATGCAGCTGCGAGATGCTT
Internal bar code:TTCGTTCTGCCTATAGAACTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:4770
LEAP-Seq percent confirming:56.5217
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGCAGTGACTTGTGCCTG
Suggested primer 2:GATGCACAATCGTCGGATGC