Insertion junction: CLIP2.041221_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.041221
Chromosome:chromosome 14
Location:1543337
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g618000 EFH9 EF-hand Calcium binding protein; (1 of 5) PTHR23050:SF90 - CENTRIN-3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGGGGGATCCACGGTGGGGAGGAAGAGTACGAGGGGAAGCGGGCGAGC
Internal bar code:AGAATTGGCGACCTTCTGCTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1446
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GACGAGATTCTCAAACGCGC
Suggested primer 2:GCCACATCCACATCGCTTTC