Insertion junction: CLIP2.041226_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.041226
Chromosome:chromosome 9
Location:3273154
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394991 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTATTGACACCCAGTCATACACATACCGGTACACAAACACGCGCGCGCA
Internal bar code:TTGGCTGAGTTAGTTTTAACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1188
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CTCATGGAGGCAGTGAAGCA
Suggested primer 2:GATGAGCGAGTAGGCCAGTC