Insertion junction: CLIP2.041232_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.041232
Chromosome:chromosome 2
Location:6553557
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389200 UMM8 UbiE/COQ5 methyltransferase family protein; (1 of 1) 2.1.1.288 - Aklanonic acid methyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCACGCCGGAGCTGCGCGTGTGAAAGCATGCGGCGCGCCAGAGTATCCG
Internal bar code:AGTATGTGAATGACAAACAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1504
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCTGGACACAATGCCTAA
Suggested primer 2:CGTTAGCGCTTCCAAATCCG