Insertion junction: CLIP2.041234_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.041234
Chromosome:chromosome 13
Location:4668621
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g604000 outside_mRNA
Cre13.g801578 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGTTTCCCCAAAACCCATACATGCGCTTCCCACTTGGTGGCCTTTCAA
Internal bar code:AATGGGCTATTATGCGTTATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:535
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAGTGAATGTGGCATTGC
Suggested primer 2:ACCTCCAGCCTACCGGTATT