Insertion junction: CLIP2.041237_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.041237
Chromosome:chromosome 9
Location:3925736
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g398141 (1 of 2) PTHR24559//PTHR24559:SF208 - FAMILY NOT NAMED // KRAB-A DOMAIN-CONTAINING PROTEIN 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGCCGCCGGTGGAATCACTGGATCGGTGGCGAAGATGATGGTGTAGGG
Internal bar code:GATGCCTTAAGCTTCGCTGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2871
LEAP-Seq percent confirming:21.4286
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:44
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCATGCACACGATACCG
Suggested primer 2:AGGAGTGACGCCCTTCTTTG