Insertion junction: CLIP2.041245_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.041245
Chromosome:chromosome 11
Location:607436
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467609 (1 of 3) K10587 - ubiquitin-protein ligase E3 A (UBE3A, E6AP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAGTGCGCTAGGTCGCATGGGTGACACGGCTACAGCCGCGGCGGCGGC
Internal bar code:ATCTCTGTACGGCTTTCGATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1049
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTGTGGTTTTGTGGCGTC
Suggested primer 2:AATGCAGGTGAGGGTCTGTG