Insertion junction: CLIP2.041246_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.041246
Chromosome:chromosome 10
Location:5743760
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g459700 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATCCGGCGGCTGTGGTGCCGGCCAGCAGGCAGCGCAGGGCCGCCTCCAG
Internal bar code:CTCCGGTAGGAACGTCCCGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1444
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TTTTTGCGACACGGCTTCAG
Suggested primer 2:GATTGAATTCGTCGCGGCAA