Insertion junction: CLIP2.041251_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.041251
Chromosome:chromosome 6
Location:89022
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g249500 MET1,DMC7,DMT1B,DMT1 (1 of 4) K00558 - DNA (cytosine-5)-methyltransferase 1 (DNMT1, dcm); Cytosine-C5 specific DNA methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAGGCACGTGGCAGGCAGCGATGGACGCGCGGCGCAGGCTGCAGCCGGA
Internal bar code:GTTGTGAAAGGTGGGGATAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1609
LEAP-Seq percent confirming:47.8261
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAGACTCCGGAACAGGTG
Suggested primer 2:ACTGCATGCACCTAGGTCAC