Insertion junction: CLIP2.041256_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.041256
Chromosome:chromosome 14
Location:3465855
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g630450 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCCAAAAGAGCGAGGAGGAGAGCGTGGCCTATGGCGTAGCGTGGCGAA
Internal bar code:GTACCAGTGGGTCATATGTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:178
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGTGTGAATTTCGAGGGA
Suggested primer 2:CAGCACACAAAAGGGACGTG