Insertion junction: CLIP2.041262_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.041262
Chromosome:chromosome 12
Location:1299966
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g489450 (1 of 2) IPR017993 - Atrophin-1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTGAAGCCGGAGTTGTAGCCGCCGGCGCCACAGCTCGCGCGAGGTCGTC
Internal bar code:TAGGATGCTTAAAACTACTACG

Confirmation - LEAP-Seq

LEAP-Seq distance:2971
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:TACCGCATTCAGGAGATCGC
Suggested primer 2:ATGACCAGGTGACGCTCTTG