Insertion junction: CLIP2.041265_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.041265
Chromosome:chromosome 9
Location:6408763
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g414750 ELG33 (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase; Exostosin-like glycosyltransferase 33 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCCTGTGGTATGCCGCCATCTCCCCAGCCCCCTTACCCCTGCACACAC
Internal bar code:TACAAGGGATGTGTTCTGCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2495
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGTGTTCTGTCTGCACGA
Suggested primer 2:ACGGAATGCCAAAACAGCAC