Insertion junction: CLIP2.041271_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.041271
Chromosome:chromosome 12
Location:8484393
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g549600 (1 of 96) IPR019734 - Tetratricopeptide repeat intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGTCATGCGTGTTTCCTCCGAGTCATGCGCCCTCTGACACACATACCGT
Internal bar code:GCAACTGATAGTTACGGTGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1395
LEAP-Seq percent confirming:73.913
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GCGATTTGATTCATGCCCCC
Suggested primer 2:CACATCCTCGGCAGGTTTCT