Insertion junction: CLIP2.041273_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.041273
Chromosome:chromosome 3
Location:8200725
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g200350 SMM12 S-adenosyl-L-methionine-dependent methyltransferase; (1 of 1) PTHR10108//PTHR10108:SF706 - METHYLTRANSFERASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGGCATTCGCACCTTCAAGGTATAGGTAGCTGCGTGTGTCGTGGCTT
Internal bar code:GCTATTACGTACATTATAGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:675
LEAP-Seq percent confirming:44.8718
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:43
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:CCACAACGCCTCTTTCTCCT
Suggested primer 2:ACCCTATACCCACAGGCCAT