Insertion junction: CLIP2.041278_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.041278
Chromosome:chromosome 8
Location:468348
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g359000 (1 of 32) IPR006502 - Protein of unknown function PDDEXK-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTACACTGCTGCCACCACGCTGCCACCAGGGGCACCCACGAGGGGCGC
Internal bar code:GGATAATCTGATATGTAGTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2228
LEAP-Seq percent confirming:81.25
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:ACATACTTGACAGTGCCCCG
Suggested primer 2:CGAGCACGCATACATGGTTG