Insertion junction: CLIP2.041279_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.041279
Chromosome:chromosome 9
Location:4828158
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g402589 (1 of 22) PTHR11017//PTHR11017:SF145 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGCCCGCGCACCTCAAATGCCGGGCCGCCTACTACCCGCCGCTCAAG
Internal bar code:CGTCTTTCGGTGCGATCCCGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1475
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCACACCACGAAGTAGGA
Suggested primer 2:TTGCAGGGCTAGCTCATGTC