Insertion junction: CLIP2.041281_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.041281
Chromosome:chromosome 3
Location:1304564
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g150251 (1 of 80) IPR003882 - Pistil-specific extensin-like protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGCCCAGGGCCAGTAGCCCCTGTGCCGCCCAGCCCAGCGCCGCCCAGC
Internal bar code:GGTTTTATACGGACCTGACGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:741
LEAP-Seq percent confirming:48.2759
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGAGGTGGGACTGGTGAG
Suggested primer 2:CCTGGCTTGCCAAATTTCCC