Insertion junction: CLIP2.041282_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.041282
Chromosome:chromosome 16
Location:3893660
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g689050 ACX1,ACO1 Acyl-CoA oxidase/dehydrogenase; (1 of 1) PTHR10909//PTHR10909:SF250 - ELECTRON TRANSPORT OXIDOREDUCTASE // PEROXISOMAL ACYL-COENZYME A OXIDASE 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGTGTAATGGAGTCGCAGCCGTTGCAGGTGCTGTTGCAGCAGATCCCC
Internal bar code:CTTGATCGGTGATGTTTCTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:2517
LEAP-Seq percent confirming:88.0952
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GTCACATCCACAGCCACAGA
Suggested primer 2:ACTGCCTTGGCTGGGATTAC