Insertion junction: CLIP2.041284_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.041284
Chromosome:chromosome 3
Location:5629636
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g186050 (1 of 38) IPR002048//IPR011992 - EF-hand domain // EF-hand domain pair CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCAAGGCATGCAGCTGCCGCCTCAGGTGGCTGTGACTGCGCAGGCCAA
Internal bar code:GTTGTTCACTTAGCTCGAAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1418
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAAATGGATCACGACGCG
Suggested primer 2:TACAGTAAGGGCTGCTGCAC