Insertion junction: CLIP2.041288_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.041288
Chromosome:chromosome 1
Location:5769579
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g041351 (1 of 1) PTHR15967:SF0 - E2F-ASSOCIATED PHOSPHOPROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGACGTCACATATTGCGCCCTCGCCCACACAGCCGCGCGCCCCTCGCT
Internal bar code:GCTCGGGCACCAGGCATTGACA

Confirmation - LEAP-Seq

LEAP-Seq distance:3366
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:80
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:CATGTGCGCATGTGTTCACA
Suggested primer 2:AGGTTCTGGCCGAGGACTAT