Insertion junction: CLIP2.041288_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.041288
Chromosome:chromosome 1
Location:5769581
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g041351 (1 of 1) PTHR15967:SF0 - E2F-ASSOCIATED PHOSPHOPROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGATGGTAGAGCGCGGGACTGAGGGTTCATATGCCGCCATACGCCATAC
Internal bar code:GAAAACCGATTGGGCAAATGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:303
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTTCTGGCCGAGGACTAT
Suggested primer 2:CATGTGCGCATGTGTTCACA