Insertion junction: CLIP2.041292_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.041292
Chromosome:chromosome 1
Location:3015616
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g019000 (1 of 1) PF06094 - Gamma-glutamyl cyclotransferase, AIG2-like (GGACT) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCTGTCTTCCCCACCACCGTCCTGCATGCCACGAAGCCATGGCGCCAA
Internal bar code:TATGTGATCAACAAAAGGGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2781
LEAP-Seq percent confirming:73.3333
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGAGCGAGTGACAACAGA
Suggested primer 2:GAAGCGCTCCCAAACCAAAG