Insertion junction: CLIP2.041294_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.041294
Chromosome:chromosome 7
Location:3857292
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g338950 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGTAGCGCACGCGTAGGACCGAGCATTGCCAGCGTCCATGCGTTAGTA
Internal bar code:TATTTATGATCTGGCACTTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1312
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TTACCGAAGAACTGGCCCAC
Suggested primer 2:GTTGTTGTTGCAGGCTCCTG