Insertion junction: CLIP2.041300_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.041300
Chromosome:chromosome 17
Location:1645510
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g707750 (1 of 1) PTHR31040//PTHR31040:SF1 - FAMILY NOT NAMED // NURIM intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATGTATGCCGTATCGATACAGCACCTCCTGGGGGCGGTGCGTGCCGCA
Internal bar code:AAGCAGGTGCGATTCTCAGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3907
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:95
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:100

Suggested primers for confirmation by PCR

Suggested primer 1:ACACCTCTTGATGGTCTGCG
Suggested primer 2:AGTACACGTTGAGCACCAGG