Insertion junction: CLIP2.041308_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.041308
Chromosome:chromosome 14
Location:3468422
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g630450 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACTCATATTAAAAACAGATTCACAACCGGGAAGCAGCGCTGGGCGTCG
Internal bar code:ATCTATAATACTTATGTTGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1005
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TCAAGGGCAGAGGAGATCGA
Suggested primer 2:GTTTGGGACCTTGCAAGCAG