Insertion junction: CLIP2.041314_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.041314
Chromosome:chromosome 10
Location:2738842
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g438000 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTGCAGCTGGCGGGGCTCCCGCGCGGCAGCGCGAAGCCCCGCGCGTCG
Internal bar code:AACCAGACGTTGTAACTTGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:350
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCGGAAGAACCAACTCT
Suggested primer 2:GGCCATATCCTCATGCACGA