Insertion junction: CLIP2.041316_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.041316
Chromosome:chromosome 9
Location:643708
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g404904 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCGCTCATCGCCCTTTGATTCGGGTACCCTCCGCCGCCTGCACCAGTC
Internal bar code:GTGGTGCGCTATCTAGGGCCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3201
LEAP-Seq percent confirming:90.604
LEAP-Seq n confirming:135
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:149

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGATGCATGTCAGTGCCA
Suggested primer 2:CAGCCAGCACCGCATTATTC