Insertion junction: CLIP2.041325_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.041325
Chromosome:chromosome 11
Location:2016784
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467765 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGTGGTGTGAGCTGCTCCTGGTGAGCACGCCGCCGCCGCCGCCATGCCC
Internal bar code:CTTGAGACTGATGCTCAGTGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2895
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CTTAGCTACCGCCACCTAGC
Suggested primer 2:CCGCCATACCAAAAGAAGCG