Insertion junction: CLIP2.041329_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.041329
Chromosome:chromosome 17
Location:4335533
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802083 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTGGAGGCAACGAGCCACGTCGGCAGCTCCCGCGCCAGCTGCAGTGGG
Internal bar code:AGTGGCGATTCGGCAGAGGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2851
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:ACAAGGTGGAGGGCATGATG
Suggested primer 2:GAGAGAGCAAAGTGGGGGAC