Insertion junction: CLIP2.041336_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.041336
Chromosome:chromosome 12
Location:3256228
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g499450 (1 of 2) IPR000626//IPR009060//IPR015940//IPR029071 - Ubiquitin domain // UBA-like // Ubiquitin-associated domain // Ubiquitin-related domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCACTGGACGCACCCGTCATATCCTCCTCCTGGTCTTCCTCGTACTCCT
Internal bar code:TTATGGTGGCAGGCCACTTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3374
LEAP-Seq percent confirming:86.2069
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGTATTGTATGGAGGGCA
Suggested primer 2:CAGTACCAGGTCATTGCCGT