Insertion junction: CLIP2.041336_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.041336
Chromosome:chromosome 12
Location:3256237
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g499450 (1 of 2) IPR000626//IPR009060//IPR015940//IPR029071 - Ubiquitin domain // UBA-like // Ubiquitin-associated domain // Ubiquitin-related domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAGGTTGCCTGGGATACGGTTGCCAGGTCCTGACAGACACGGGTACTG
Internal bar code:TTATGGTGGCAGGCCACTTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1119
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTACCAGGTCATTGCCGT
Suggested primer 2:GCGGTATTGTATGGAGGGCA