Insertion junction: CLIP2.041338_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.041338
Chromosome:chromosome 3
Location:2832798
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g162100 PIMT2 Protein-L-isoaspartate O-methyltransferase; (1 of 3) K00573 - protein-L-isoaspartate(D-aspartate) O-methyltransferase (E2.1.1.77, pcm) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCTGCACAGCACAAATCGGCAGTTTGTACGACGGCGTGTAAGGGCGA
Internal bar code:AGTCGGTCCATACGGCAGACGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1202
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:AGATAGAGGCGCATGTTCGG
Suggested primer 2:ACCAGAAGCTTGTGGACTCG