Insertion junction: CLIP2.041350_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.041350
Chromosome:chromosome 9
Location:5660047
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g410200 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCCGCTGACGCCCGACGGCGGCTTGGCAGCGGCGGGGGCGGCGACGCC
Internal bar code:TGGTTCTCGAACCACCGCTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1211
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TGGACAACATTCGGCGAGTC
Suggested primer 2:TCACACCCCAAACACACACA