Insertion junction: CLIP2.041353_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.041353
Chromosome:chromosome 7
Location:4222306
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g341925 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGTTTTCATGCTGCTGTGCCGCTGCAGGTGCGGACTGTGTGGCAGGCG
Internal bar code:TCATTATTCCTCGATTGATAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3548
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CATTGTACGACTGCTGCTGC
Suggested primer 2:GGACACACGTTGAAACCTGC