Insertion junction: CLIP2.041358_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.041358
Chromosome:chromosome 14
Location:599782
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g611850 (1 of 1) K17087 - transmembrane 9 superfamily member 3 (TM9SF3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTCGGGTTAGTGCGGCCCCGCGCGTTTTCGAGGTGCATCAACCATGCA
Internal bar code:GGCACGTTCGATGTTCACAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1617
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGCAACCAAAGTGAGCTG
Suggested primer 2:CAGTATTGCCGCCTGATTGC