Insertion junction: CLIP2.041360_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.041360
Chromosome:chromosome 5
Location:2769819
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g240850 THIC1,THIC,THI8 (1 of 1) 4.1.99.17 - Phosphomethylpyrimidine synthase; Hydroxymethylpyrimidine phosphate synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTAGCCGCCTTGTATTGCCACGTGAACGGCCCTCTACACCCGACGTGCC
Internal bar code:GTGTTAATTTTGAGCTCACCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1096
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAGCTGACTGGACGAAAT
Suggested primer 2:CTCATCCGCGTCACTCTCTC