Insertion junction: CLIP2.041363_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.041363
Chromosome:chromosome 12
Location:1436871
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g488400 KATL5 katanin like protein 5, similar to the catalytic subunit; (1 of 9) 3.6.4.3 - Microtubule-severing ATPase / Katanin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGTGGGTGCCGGGATGGGGCCTGCTTGCTTCGCGCGGGTAGCTGGGT
Internal bar code:CGAGGTGAGGTTGTAACGCAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:562
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCCATCCCGCCTGTTAAA
Suggested primer 2:GCTTGGCTGGGTTTGACTTG