Insertion junction: CLIP2.041365_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.041365
Chromosome:chromosome 14
Location:1865177
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g619854 ELG35 (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase; Exostosin-like glycosyltransferase 35 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATGGTCAGGTTGCGACATGTCGACTTGTGAATTGCGACATACAACAAT
Internal bar code:ATATAATTACTGGACTTCGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1318
LEAP-Seq percent confirming:2.89855
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:67
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGTCAGGTTGCGACATGT
Suggested primer 2:CATGCGTTGACAGTCGGTTC