Insertion junction: CLIP2.041365_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.041365
Chromosome:chromosome 14
Location:1865183
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g619854 ELG35 (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase; Exostosin-like glycosyltransferase 35 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATGTCAAATAACTTGCAAGCTGCTATAGGTACCTTGGGGAGCTTGGGA
Internal bar code:ATATAATTACTGGACTTCGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:624
LEAP-Seq percent confirming:97.2222
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CATGCGTTGACAGTCGGTTC
Suggested primer 2:ATGGTCAGGTTGCGACATGT