Insertion junction: CLIP2.041369_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.041369
Chromosome:chromosome 9
Location:5908676
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g411975 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTGGTGCCGCGCTCACCGAACTCGACCCAGAAGGACTTCCACTGCAGC
Internal bar code:ACCGGTAGGACAAGCACACCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:13196
LEAP-Seq percent confirming:98.8889
LEAP-Seq n confirming:89
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:90

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGCTCGTTTCATTTTGCC
Suggested primer 2:GCTCTGTCCTCTTGGAGCTC