Insertion junction: CLIP2.041369_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.041369
Chromosome:chromosome 9
Location:5908678
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g411975 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCAATGTAAGGAGCCGCAGCGTTGGAAACCCAACGACGGCTGCAGGCGC
Internal bar code:GTTTTTGCTCTTGCCTAAGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2462
LEAP-Seq percent confirming:33.871
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:41
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCTGTCCTCTTGGAGCTC
Suggested primer 2:ACGGCTCGTTTCATTTTGCC