Insertion junction: CLIP2.041379_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.041379
Chromosome:chromosome 2
Location:3433086
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g098750 (1 of 7) PF00027//PF00520 - Cyclic nucleotide-binding domain (cNMP_binding) // Ion transport protein (Ion_trans) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGCATTTGCGCATTGCAGTAGAATTTGACGTAAGTTATTTATGGTTAT
Internal bar code:TGGTTGTTACCAAGTCCAATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:432
LEAP-Seq percent confirming:11.1111
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCCTCACCTACTTCCGGA
Suggested primer 2:TGGTGTCCACTACTCCCGAT