Insertion junction: CLIP2.041379_4

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.041379
Chromosome:chromosome 14
Location:1660622
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g618750 FAP246 Flagellar Associated Protein 246; (1 of 1) IPR001611//IPR002048//IPR002931//IPR003591 - Leucine-rich repeat // EF-hand domain // Transglutaminase-like // Leucine-rich repeat, typical subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCATACGTGTGGGTGCGTGTGGGCATGTGAGGGGGTTTCGACCTGTGGT
Internal bar code:TATCGGGCGTGTGGTTAATGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1187
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCCCCCATCATTAGCTCC
Suggested primer 2:AGAGCAGGTGAGAGGAGGAG