Insertion junction: CLIP2.041383_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.041383
Chromosome:chromosome 17
Location:1043470
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g703450 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTTGGTAGCAGTCAGGCTCTGTCAGTGCAACTATCTAGCAGGGTACCT
Internal bar code:CGCGGTTCCGATACTACGAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1193
LEAP-Seq percent confirming:13.3333
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GGATGATTGCGCCAATGTCC
Suggested primer 2:GTGCGTGTGTGTGTGTTACC